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Upload modeling_dplm2.py with huggingface_hub

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  1. modeling_dplm2.py +5 -1
modeling_dplm2.py CHANGED
@@ -1819,7 +1819,7 @@ class DPLM2Model(DPLM2PreTrainedModel, EmbeddingMixin):
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  )
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- class DPLM2ForMaskedLM(DPLM2PreTrainedModel, EmbeddingMixin):
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  config_class = DPLM2Config
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  def __init__(self, config, dropout: float = 0.1, vocab_size: Optional[int] = None):
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  config.hidden_dropout_prob = dropout
@@ -1835,6 +1835,7 @@ class DPLM2ForMaskedLM(DPLM2PreTrainedModel, EmbeddingMixin):
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  self.tokenizer = self.__class__.tokenizer
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  if isinstance(config._name_or_path, str) and len(config._name_or_path) > 0:
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  self.tokenizer = EsmTokenizer.from_pretrained(config._name_or_path)
 
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  def get_input_embeddings(self) -> nn.Module:
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  return self.esm.get_input_embeddings()
@@ -1874,6 +1875,9 @@ class DPLM2ForMaskedLM(DPLM2PreTrainedModel, EmbeddingMixin):
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  store_all_hidden_states=store_all_hidden_states,
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  )
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  def forward(
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  self,
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  input_ids: Optional[torch.Tensor] = None,
 
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  )
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+ class DPLM2ForMaskedLM(FastPLMTestTimeTrainingMixin, DPLM2PreTrainedModel, EmbeddingMixin):
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  config_class = DPLM2Config
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  def __init__(self, config, dropout: float = 0.1, vocab_size: Optional[int] = None):
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  config.hidden_dropout_prob = dropout
 
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  self.tokenizer = self.__class__.tokenizer
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  if isinstance(config._name_or_path, str) and len(config._name_or_path) > 0:
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  self.tokenizer = EsmTokenizer.from_pretrained(config._name_or_path)
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+ self.init_ttt({"lora_target_replace_module": "ModifiedEsmAttention"})
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  def get_input_embeddings(self) -> nn.Module:
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  return self.esm.get_input_embeddings()
 
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  store_all_hidden_states=store_all_hidden_states,
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  )
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+ def _ttt_get_trainable_modules(self) -> list[nn.Module]:
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+ return [self.esm]
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+
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  def forward(
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  self,
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  input_ids: Optional[torch.Tensor] = None,