| # ========================= | |
| # Web UI | |
| # ========================= | |
| gradio==4.44.1 | |
| gradio_client==1.3.0 | |
| # ========================= | |
| # Core ML | |
| # ========================= | |
| torch==2.4.1 | |
| torchvision==0.19.1 | |
| transformers==4.46.3 | |
| tokenizers==0.20.3 | |
| safetensors | |
| # ========================= | |
| # Fairseq (⚠️ 关键，锁 commit) | |
| # fairseq==0.10.2 or 0.9.0 local install | |
| # ========================= | |
| # ========================= | |
| # Scientific | |
| # ========================= | |
| numpy==1.23.5 | |
| pandas==1.5.3 | |
| scipy | |
| scikit-learn | |
| # ========================= | |
| # RNA / Bio | |
| # ========================= | |
| ViennaRNA==2.7.0 | |
| biopython==1.79 | |
| pyfaidx | |
| editdistance | |
| regex | |
| pyBigWig | |
| # ========================= | |
| # Hugging Face | |
| # ========================= | |
| huggingface-hub | |
| hf-xet | |
| # ========================= | |
| # Utils | |
| # ========================= | |
| tqdm | |
| requests | |
| pyyaml | |
| orjson | |
| draw_rna | |