Instructions to use whoisjones/otter-bi-mmbert with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- Transformers
How to use whoisjones/otter-bi-mmbert with Transformers:
# Use a pipeline as a high-level helper from transformers import pipeline pipe = pipeline("token-classification", model="whoisjones/otter-bi-mmbert", trust_remote_code=True)# Load model directly from transformers import AutoModelForTokenClassification model = AutoModelForTokenClassification.from_pretrained("whoisjones/otter-bi-mmbert", trust_remote_code=True, dtype="auto") - Notebooks
- Google Colab
- Kaggle
Upload loss.py with huggingface_hub
Browse files
loss.py
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import torch
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import torch.nn as nn
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import torch.nn.functional as F
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class BCELoss(nn.Module):
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def forward(self, logits, labels, mask=None, pos_weight=None, **kwargs):
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loss = F.binary_cross_entropy_with_logits(
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logits,
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labels,
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reduction="none",
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pos_weight=pos_weight
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)
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if mask is not None:
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loss = (loss * mask).mean() * 100
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else:
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loss = loss.mean() * 100
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return loss
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class FocalLoss(nn.Module):
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def __init__(self, alpha=0.5, gamma=1.0):
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super().__init__()
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self.alpha = alpha
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self.gamma = gamma
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def forward(self, logits, labels, mask=None, pos_weight=None, **kwargs):
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if not (0 <= self.alpha <= 1) and self.alpha != -1:
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raise ValueError(f"Invalid alpha value: {self.alpha}. alpha must be in the range [0,1] or -1 for ignore.")
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p = torch.sigmoid(logits)
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ce_loss = F.binary_cross_entropy_with_logits(logits, labels, reduction="none", pos_weight=pos_weight)
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p_t = p * labels + (1 - p) * (1 - labels)
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loss = ce_loss * ((1 - p_t) ** self.gamma)
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if self.alpha >= 0:
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alpha_t = self.alpha * labels + (1 - self.alpha) * (1 - labels)
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loss = alpha_t * loss
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if mask is not None:
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loss = (loss * mask).mean() * 100
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else:
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loss = loss.mean() * 100
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return loss
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class ContrastiveLoss(nn.Module):
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def __init__(self, tau: float = 1.0):
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super().__init__()
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self.tau = tau
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def forward(
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self,
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scores: torch.tensor,
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positions: list[int],
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mask: torch.tensor,
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prob_mask: torch.tensor = None
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) -> torch.tensor:
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batch_size, seq_length = scores.size(0), scores.size(1)
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scores = scores / self.tau
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if len(scores.shape) == 3:
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scores = scores.view(batch_size, -1)
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mask = mask.view(batch_size, -1)
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log_probs = self.masked_log_softmax(scores, mask)
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log_probs = log_probs.view(batch_size, seq_length, seq_length)
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start_positions, end_positions = positions
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batch_indices = list(range(batch_size))
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log_probs = log_probs[batch_indices, start_positions, end_positions]
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else:
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log_probs = self.masked_log_softmax(scores, mask)
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batch_indices = list(range(batch_size))
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log_probs = log_probs[batch_indices, positions]
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if prob_mask is not None:
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log_probs = log_probs * prob_mask
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return - log_probs.mean()
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def masked_log_softmax(self, vector: torch.tensor, mask: torch.tensor, dim: int = -1) -> torch.tensor:
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if mask is not None:
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while mask.dim() < vector.dim():
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mask = mask.unsqueeze(1)
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vector = vector + (mask + self.tiny_value_of_dtype(vector.dtype)).log()
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return torch.nn.functional.log_softmax(vector, dim=dim)
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def tiny_value_of_dtype(self, dtype: torch.dtype) -> float:
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if not dtype.is_floating_point:
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raise TypeError("Only supports floating point dtypes.")
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if dtype == torch.float or dtype == torch.double or dtype == torch.bfloat16:
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return 1e-13
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elif dtype == torch.half:
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return 1e-4
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else:
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raise TypeError("Does not support dtype " + str(dtype))
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